教师基本信息

姓名：田卫东

单位：复旦大学生命科学学院

职称：教授

邮箱：weidong.tian@fudan.edu.cn

研究方向

    长期从事生物信息学研究，主要研究方向包括疾病编码和非编码变异的致病机制分析和算法开发、单细胞测序数据的分析和应用等。

代表论文

1. Zhang, F., Li, X., Tian, W#. (2020) Unsupervised Inference of Developmental Directions for Single Cells Using VECTOR. Cell Rep. 2020 Aug 25;32(8):108069.  doi: 10.1016/j.celrep.2020.108069. (PMID: 32846127)

2. Zhang, F., Wu, Y., Tian, W#. (2019) A novel approach to remove the batch effect of single-cell data. Cell Discovery. 2019 Sep 24;5:46. doi: 10.1038/s41421-019-0114-x. (PMID: PMC6796914)

3. Li, Z*., Zhang, F*., Wang, Y., Qiu, Y., Wu, Y., Lu, Y., Yang, L., Qu, W.J., Wang, H., Zhou, W.#, and Tian W#.(2019) PhenoPro: A novel toolkit for assisting in the diagnosis of Mendelian diseases. Bioinformatics. 2019 Feb 19. pii: btz100. doi: 10.1093/bioinformatics/btz100 (PMID: 30843052)

4. Zhang, F., Lu, Y., Yan, S., Xing, Q., Tian W#. (2017) SPRINT: an SNP-free toolkit for identifying RNA editing sites. Bioinformatics. July 24; DOI: https://doi.org/10.1093/bioinformatics/btx473. (PMID: 29036410)

5. Chen, J. and Tian, W.# (2016) Explaining the disease phenotype of intergenic SNP through predicted long range regulation. Nucleic acids research, 44, 8641-8654. (PMID: 27280978)

6. Dong, X., Wang, X., Zhang, F. and Tian, W#. (2016) Genome-Wide Identification of Regulatory Sequences Undergoing Accelerated Evolution in the Human Genome. Molecular Biology and Evolution, 33, 2565-2575. (PMID: 27401230)

7. Gong, Q., Ning, W. and Tian, W#. (2016) GoFDR: A sequence alignment based method for predicting protein functions. Methods, 93, 3-14. (PMID: 26277418)

8. Chang, B.H. and Tian, W.# (2016) GSA-Lightning: ultra-fast permutation-based gene set analysis. Bioinformatics, 32, 3029-3031. (PMID: 27296982)